CODEXIS, INC. — Director's Dealing 2011

Jun 3, 2011

SEC Form 4 — Statement of Changes in Beneficial Ownership

Issuer: CODEXIS INC (CDXS)
CIK: 0001200375
Period of Report: 2011-06-01

Reporting Person: SHAW ALAN (Director, President and CEO)

Non-Derivative Transactions

Date	Security	Code	Shares	Price	A/D	Holdings After	Ownership
2011-06-01	Common Stock	M	5400	$0.60	Acquired	80400	Direct
2011-06-01	Common Stock	S	5400	$10.4124	Disposed	75000	Direct
2011-06-02	Common Stock	M	9600	$0.60	Acquired	84600	Direct
2011-06-02	Common Stock	S	9600	$10.3735	Disposed	75000	Direct

Derivative Transactions

Date	Security	Exercise Price	Code	Shares	A/D	Expiration	Underlying	Ownership
2011-06-01	Stock Option (right to buy)	$0.60	M	5400	Disposed	2013-05-16	Common Stock (5400)	Direct
2011-06-02	Stock Option (right to buy)	$0.60	M	9600	Disposed	2013-05-16	Common Stock (9600)	Direct

Holdings (Non-Derivative)

Security	Shares	Ownership
Common Stock	293666	Indirect

Footnotes

F1: Includes 75,000 restricted stock units. The Reporting Person is entitled to receive one (1) share of common stock for each one (1) restricted stock unit.

F2: The sales reported in this Form 4 were effected pursuant to a Rule 10b5-1 trading plan adopted by the Reporting Person on August 11, 2010.

F3: This transaction was executed in multiple trades in prices ranging from $10.39 to $10.45. The price reported in Column 4 above reflects the weighted average sale price. The Reporting Person hereby undertakes to provide to the Securities and Exchange Commission staff, the Issuer, or a security holder of the Issuer, upon request, full information regarding the number of shares sold at each respective price within the range set forth in this footnote.

F4: Restricted stock units.

F5: This transaction was executed in multiple trades in prices ranging from $10.31 to $10.43. The price reported in Column 4 above reflects the weighted average sale price. The Reporting Person hereby undertakes to provide to the Securities and Exchange Commission staff, the Issuer, or a security holder of the Issuer, upon request, full information regarding the number of shares sold at each respective price within the range set forth in this footnote.

F6: Shares held by The Shaw Living Trust UAD 6/11/2008, Alan Shaw and Christine Shaw Trustees (the "Living Trust"). Includes 100,000 shares that were recently transferred to the Living Trust by Alan Shaw (the "Transfer"). Such Transfer only involved a change in the form of beneficial ownership and did not change the Reporting Person's pecuniary interest in the shares. Therefore, the Transfer was exempt from the reporting requirements under Section 16(a).

F7: 100% of the shares subject to the option are fully vested and exercisable.